Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015951472.1_cds_XP_016491479.1_81789
CDS Infomation

[gene=LOC107811120] [db_xref=GeneID:107811120] [protein=pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like] [protein_id=XP_016491479.1] [location=complement(22311..24242)] [gbkey=CDS]
Sequence

ATGAGCTCTTTTTTGGCTACCAGATTTGTAGTCGAATGGTATATGAAATCAATTGGTGAA
AATTCATACAAGCTGTTTGCTAAAATGTCAAAGAGACGTTACTCGTCTGGAATTTCATTA
AATGTTCGTGAAAGGTCCTTTTTTGTGGACCCAATTAAGTTTGCTGAAAAACAAAATGTG
AGATCATGGACATCAAAAATATCAAATTTGGTGAGGGAAAACCAATCCATAGAAGCAATC
AACTTGTTCAAAACAATGCTAAGAAACGAACACAAACCCAATTACGTGACAGTTTTAAGC
GTTATAAGAGCTGCTGAAAATTTGGAGTCTACAGCACGATGTGTTCACGGGTTTGCAATC
AAATTGGGTTTTGAATTGGAACTACCCATTGTGACGGCTCTTGTTGGTGTTTACTCTACT
TGGAATATGGATGCTGCATTGAAATTATTTAATCGCACAAGGTACAAGGATGTAATTTTG
TGGAGCGCAATGGTTTCAGCTTGTGTCAAGAGTGGAGAGTATGTTGATGCTATTGAACTT
TTCAGGAAAATGCTATCCTCTAGCGTGGAACCAAATTATATTAGCATTGTGGGTATTGTG
CCTGCTTGTGCAAATCTTGGTGCTTTGAAAGTTGGAAAAGAAATTCATGCTTATTCGATG
AAAATTTCATTTATTTCTCATGTTAATATCCAGAATTCTCTTGTGGATATGTATGCTAAA
TGCGGGAGTTTGAAGGCATCCGTTGCTGTTTTTCGTGGAATAGAGAAGAAGGATCTTGTT
TCATGGAGGACTATGATTCATGGATGCGTAGAAAATGATCGTTTCAATGAAGCTTTGAGT
CTGTTCTCTCAGATGAGGTATTGTTGCTTTGAACCGGATGATAGTGTTATTCGTGAAGTT
ATTGGAGCATTGTCAGAATTGGATGAGATAAAAATTGGACAGTGTTTTCACAGCCTTGTG
CTCAAGCAGGGATATTTGAGATGTGTTTCGGTAGTGACTGCTCTTCTTCACATGTATGGT
GATTTATGTGAGATTGAATCAGCCAGGAGTCTGTTTGATCGCCTGAAACCAAGAGATCTT
ATTGCCTGGAGTACAATGATTGCGGCATATGCCCAAAGTGAGCTGCCTAGTAATGCTTTT
GATATATATTGGCAGATGCAATCAGCAAATGAGAAGCCTAACGAGATCATCTATGTTAGT
CTATTACAGGCTTGTTCTTCGATGGCTGCTGAAGAGATTGGAGAAGGTATACATGCACAA
GTGATTAAAATTGTAAATATATCCAATCCCTTTTTGATATCTTCGCTTATTGACATGTAT
TGCAAATTCGGACGCATAAGCCAAGGAACGGCTATTTTCAGTGAATTTCCTAACAAAGAT
CTTATTTGCTGGAGCTCAATGATAAATGGGTATGGCATTAATGGGCATGGAAATAAGGCT
CTTGAGTGTTTCTTAGACATGTTGAACTCTGGGATAAAACCAAATGATGTTGTTTTCATT
TCTGTTCTATCTGCATGCAGTCATTGTGATCTTGAATATGAGGGGTGGAACTGGTTTTAT
GCAATGGAAGAGAGATTCGATGTTACTCCGAAACTTGCACATTATGCGTGCATGGTTGAT
ATGCTTAGTCGTCAAGGCAATATAGAAGAAGCTCTTGAATTCGTCAACAACATGCCCATC
GAGCCTGATAAGCGGATATGGGGAACTCTGCTTGCTGGCTGTAGAAAGACTCGTGTATCT
ACTGAAATCTCTGAAATTGTTGCCAAAAGGCTCATTGCTTTAGACCCAGAGAATACAAGC
TATTTTGTGATTCTGTCTAACTTATATGCAGAGCAGGGCAGATGGAAAGAGGTAGAAGAG
CTGAGGCAACTCATGGATGAGAAGAATTTGAAGAAAGAGTTGGGTTATAGCTTAATTGAG
ACCAGCCTGTAG

Peptide Sequence

PEP ID

XP_016491479.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Nicotiana tabacum]
Sequence

MSSFLATRFVVEWYMKSIGENSYKLFAKMSKRRYSSGISLNVRERSFFVDPIKFAEKQNV
RSWTSKISNLVRENQSIEAINLFKTMLRNEHKPNYVTVLSVIRAAENLESTARCVHGFAI
KLGFELELPIVTALVGVYSTWNMDAALKLFNRTRYKDVILWSAMVSACVKSGEYVDAIEL
FRKMLSSSVEPNYISIVGIVPACANLGALKVGKEIHAYSMKISFISHVNIQNSLVDMYAK
CGSLKASVAVFRGIEKKDLVSWRTMIHGCVENDRFNEALSLFSQMRYCCFEPDDSVIREV
IGALSELDEIKIGQCFHSLVLKQGYLRCVSVVTALLHMYGDLCEIESARSLFDRLKPRDL
IAWSTMIAAYAQSELPSNAFDIYWQMQSANEKPNEIIYVSLLQACSSMAAEEIGEGIHAQ
VIKIVNISNPFLISSLIDMYCKFGRISQGTAIFSEFPNKDLICWSSMINGYGINGHGNKA
LECFLDMLNSGIKPNDVVFISVLSACSHCDLEYEGWNWFYAMEERFDVTPKLAHYACMVD
MLSRQGNIEEALEFVNNMPIEPDKRIWGTLLAGCRKTRVSTEISEIVAKRLIALDPENTS
YFVILSNLYAEQGRWKEVEELRQLMDEKNLKKELGYSLIETSL

Transcript Sequence

Gene sequence data has not been registered.